Microbiology Research Papers/Topics

Biodiversity and efficacy of fungal isolates associated with Kenyan populations of potato cyst nematode (Globodera spp.)

Abstract: Potato Cyst Nematodes (PCN) (Globodera rostochiensis and G. pallida Woll.) are quarantine pests of potato (Solanum tuberosum L.) worldwide capable of causing significant yield loss and difficult to manage with conventional methods. The study explored the diversity of antagonistic fungi associated with PCN obtained from soil samples collected in Nyandarua and Nakuru Counties in Kenya and their effect on PCN egg viability and hatching was also evaluated. Twelve fungal isolates from f...

Composition, structure, and functional shifts of prokaryotic communities in response to co-composting of various nitrogenous green feedstocks

Abstract: Background Thermophilic composting is a promising method of sanitizing pathogens in manure and a source of agriculturally important thermostable enzymes and microorganisms from organic wastes. Despite the extensive studies on compost prokaryotes, shifts in microbial profiles under the influence of various green materials and composting days are still not well understood, considering the complexity of the green material sources. Here, the effect of regimens of green composting mater...

Laboratory and Field Performance of Metarhizium anisopliae Isolate ICIPE 41 for Sustainable Control of the Invasive Fall Armyworm Spodoptera frugiperda (Lepidoptera: Noctuidae)

Abstract: To overcome the negative impacts of invasive fall armyworm (FAW), this study assessed the laboratory and field efficacy of aqueous and oil-based formulations of Metarhizium anisopliae ICIPE 41 as an alternative source for FAW management. Three oil formulations, including canola, corn and olive oils and an aqueous formulation of ICIPE 41, were assessed against the second-instar larvae of FAW in the laboratory. Field experiments were also conducted at Mbita and Migori, Kenya, using t...

Multi-omics analyses reveal rumen microbes and secondary metabolites that are unique to livestock species

Abstract: Ruminant livestock, including cattle, sheep, goats, and camels, possess a distinctive digestive system with complex microbiota communities critical for feed conversion and secondary metabolite production, including greenhouse gases. Yet, there is limited knowledge regarding the diversity of rumen microbes and metabolites benefiting livestock physiology, productivity, climate impact, and defense mechanisms across ruminant species. In this study, we utilized metataxonomics and metabo...

Editorial: Microbiota: A Consequential Third Wheel in the Mosquito-Pathogen Relationship

Abstract: Mosquitoes are by far the most important vectors of human disease. There are hundreds of millions of cases of dengue annually, while Chikungunya and Zika have recently caused major outbreaks. Malaria remains a major driver of poverty in sub-Saharan Africa where it is responsible for about 400,000 deaths each year. In addition, about 50 million cases of lymphatic filariasis still occur annually. The microbial communities harbored by mosquitoes have been the focus of great scientific...

Mathematical modelling of the interactive dynamics of wild and Microsporidia MB-infected mosquitoes

Abstract: A recent discovery highlighted that mosquitoes infected with Microsporidia MB are unable to transmit the Plasmodium to humans. Microsporidia MB is a symbiont transmitted vertically and horizontally in the mosquito population, and these transmission routes are known to favor the persistence of the parasite in the mosquito population. Despite the dual transmission, data from field experiments reveal a low prevalence of MB-infected mosquitoes in nature. This study proposes a compartme...

Complete Reference Genome Assembly for Commensalibacter sp. Strain AMU001, an Acetic Acid Bacterium Isolated from the Gut of Honey Bees

Abstract: We report here the genome sequence of a Commensalibacter sp. strain (AMU001) isolated from honey bees (Apis mellifera) from Seychelles. By combining long- and short-read sequencing technologies, we produced the first complete reference genome assembly for the Commensalibacter genus. We anticipate that this will aid future comparative and functional genomic studies.

Bacterial diversity in the intestinal tract of the funguscultivating termite Macrotermes michaelseni (Sjöstedt)

Abstract: Microorganisms in the intestinal tracts of termites play a crucial role in the nutritional physiology of termites. The bacterial diversity in the fungus-cultivating Macrotermes michaelseni was examined using both molecular and culture dependent methods. Total DNA was extracted from the gut of the termite and 16S rRNA genes were amplified using bacterial specific primers. Representatives from forty-one (41) RFLP patterns from a total of one hundred and two (102) clones were sequence...

Genetic Diversity, Distribution, and Genomic Characterization of Antibiotic Resistance and Virulence of Clinical Pseudomonas aeruginosa Strains in Kenya

Abstract: Pseudomonas aeruginosa is a leading cause of nosocomial infections worldwide. It can produce a range of debilitating infections, have a propensity for developing antimicrobial resistance, and present with a variety of potent virulence factors. This study investigated the sequence types (ST), phenotypic antimicrobial susceptibility profiles, and resistance and virulence genes among clinical isolates from urinary tract and skin and soft tissue infections. Fifty-six P. aeruginosa clin...

Enhancing Cowpea Production through Arbuscular Mycorrhizal Fungi Inoculation and Wide Interspecific Crosses

Abstract: Cowpea is a multipurpose legume crop that serves as human food, livestock fodder, and income source and is widely produced in sub-Saharan Africa. Soil fertility and attack by insect pests and diseases are significant limitations to its production. Although farm inputs such as phosphate-rich fertilizers and pesticides can solve the mentioned constraints, they are costly for resource-poor farmers. This study aimed at determining the effect of arbuscular mycorrhizal fungi inoculation ...

Evaluation of Yield, Chemical Composition and Antimicrobial Activity of Essential Oils of Tagetes Minuta L. (Asteraceae) Against Selected Phytopathogens

Abstract: Phytopathogenic fungi and bacteria cause enormous crop yield losses worldwide. Over the years, management of plant pathogens has primarily relied on the use of synthetic chemical antimicrobials and development of disease resistant varieties. Exploration for biologically active compounds from plants with an aim of discovery and development of novel and eco-friendly biopesticides to combat current and emerging phytopathogens has received increased interest in the recent past. This st...

Management of Mycotoxigenic Fungi and Associated Mycotoxins in Maize by Use of Hermetic Storage

Abstract: Maize is a staple food crop in Kenya with about 90% of the rural households depending on it. However, the grain is vulnerable to degradation by mycotoxin producing fungi in the field and during storage. Mycotoxins produced by these fungi cause significant economic losses and deleterious health effects to humans and animals. Strategies such as storage of maize in hermetic bags have been developed to reduce post-harvest grain losses due to pest attack, fungal growth and mycotoxin con...

Comparative and Functional Analysis of Tsetse Fly Aquaporins

Abstract: Tsetse flies (Glossina sp) are the vector of African trypanosomes, the causative agents of sleeping sickness in man and Nagana in cattle. The insect is strictly hematophagous, taking in significantly high quantities of water during bloodmeals that present a considerable osmotic challenge. This necessitates machinery for eliminating excess water. One potential candidate is a group of membrane channel proteins called aquaporins (AQPs) that are responsible for the movement of water ac...

Isolation and characterization of actinobacteria with potential for control of fusarium spp and colletotrichum kahawae

Abstract: Smallholder subsistence farming is important in the production of food crops for basic livelihoods and income generation in rural areas. However, yields have remained low due to high disease, weed and pest incidences. Currently, crop pests and diseases are largely controlled by use of chemicals, which have adverse effects on the environment and nontarget organisms. There is need for new methods that are environmentally safe to supplement existing control strategies in order to enha...

Impact of Metarhizium anisopliae and Beauveria bassiana on Bee Pollinators (Hymenoptera: Apidae), and Modelling their Performance in Bee Colonies

Abstract: Insect pollination sustains the biodiversity of 90% of wild plants, and 75% of crop species for food and nutritional security. Chemical pesticides used to manage arthropod pests constitute a key driver to the unprecedented declines of insect pollinators worldwide. Hence, biopesticides based on entomopathogenic fungi (EPF) are being promoted as safer alternatives. The effects of EPF on insect pollinators have not been investigated in detail for the application in pollinator-resource...


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